IL_7ZOD_011
3D structure
- PDB id
- 7ZOD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 7ZOD|1|b|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZOD_011 not in the Motif Atlas
- Homologous match to IL_5J7L_248
- Geometric discrepancy: 0.4976
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7ZOD|1|b|G|81
7ZOD|1|b|U|82
7ZOD|1|b|A|83
7ZOD|1|b|A|84
7ZOD|1|b|G|85
*
7ZOD|1|b|C|97
7ZOD|1|b|G|98
7ZOD|1|b|U|99
7ZOD|1|b|U|100
7ZOD|1|b|A|101
7ZOD|1|b|U|102
7ZOD|1|b|A|103
7ZOD|1|b|A|104
7ZOD|1|b|C|105
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L29
- Chain u
- 50S ribosomal protein L24
Coloring options: