IL_7ZOD_111

3D structure

PDB id

7ZOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GCAAGGG*UACCAACC

Length

15 nucleotides

Bulged bases

7ZOD|1|b|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZOD|1|b|G|875
7ZOD|1|b|C|876
7ZOD|1|b|A|877
7ZOD|1|b|A|878
7ZOD|1|b|G|879
7ZOD|1|b|G|880
7ZOD|1|b|G|881
*
7ZOD|1|b|U|895
7ZOD|1|b|A|896
7ZOD|1|b|C|897
7ZOD|1|b|C|898
7ZOD|1|b|A|899
7ZOD|1|b|A|900
7ZOD|1|b|C|901
7ZOD|1|b|C|902

Current chains

Chain b

23S rRNA

Nearby chains

Chain m

50S ribosomal protein L16