IL_7ZRS_010

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

UUAUUU*AUUCA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZRS_010 not in the Motif Atlas

Homologous match to IL_4V88_393

Geometric discrepancy: 0.1144

The information below is about IL_4V88_393

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37842.2

Basepair signature

cWW-cWW-L-R-cWW-cWW-R-L

Number of instances in this motif group

4

Unit IDs

7ZRS|1|2|U|117
7ZRS|1|2|U|118
7ZRS|1|2|A|119
7ZRS|1|2|U|120
7ZRS|1|2|U|121
7ZRS|1|2|U|122
*
7ZRS|1|2|A|295
7ZRS|1|2|U|296
7ZRS|1|2|U|297
7ZRS|1|2|C|298
7ZRS|1|2|A|299

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AE

40S ribosomal protein S4-A

Chain AI

40S ribosomal protein S8-A