IL_7ZRS_040
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- UUU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_040 not in the Motif Atlas
- Homologous match to IL_4V88_424
- Geometric discrepancy: 0.2242
- The information below is about IL_4V88_424
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7ZRS|1|2|U|748
7ZRS|1|2|U|749
7ZRS|1|2|U|750
*
7ZRS|1|2|A|799
7ZRS|1|2|U|800
7ZRS|1|2|G|801
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AE
- 40S ribosomal protein S4-A
- Chain AH
- 40S ribosomal protein S7-A
- Chain AL
- 40S ribosomal protein S11-A
- Chain AW
- RPS22A isoform 1
Coloring options: