IL_7ZRS_066
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 7ZRS|1|2|C|1274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_066 not in the Motif Atlas
- Geometric match to IL_4V88_450
- Geometric discrepancy: 0.1179
- The information below is about IL_4V88_450
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.2
- Basepair signature
- cWW-L-cWS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7ZRS|1|2|U|1272
7ZRS|1|2|G|1273
7ZRS|1|2|C|1274
7ZRS|1|2|A|1275
7ZRS|1|2|U|1276
*
7ZRS|1|2|A|1436
7ZRS|1|2|U|1437
7ZRS|1|2|G|1438
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AD
- RPS3 isoform 1
- Chain AK
- 40S ribosomal protein S10-A
- Chain AU
- RPS20 isoform 1
- Chain Ad
- RPS29A isoform 1
Coloring options: