IL_7ZRS_120
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GGAUAAAUC*GGAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7ZRS|1|5|A|520, 7ZRS|1|5|U|521
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_120 not in the Motif Atlas
- Homologous match to IL_5TBW_019
- Geometric discrepancy: 0.079
- The information below is about IL_5TBW_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74024.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
7ZRS|1|5|G|518
7ZRS|1|5|G|519
7ZRS|1|5|A|520
7ZRS|1|5|U|521
7ZRS|1|5|A|522
7ZRS|1|5|A|523
7ZRS|1|5|A|524
7ZRS|1|5|U|525
7ZRS|1|5|C|526
*
7ZRS|1|5|G|568
7ZRS|1|5|G|569
7ZRS|1|5|A|570
7ZRS|1|5|A|571
7ZRS|1|5|U|572
7ZRS|1|5|A|573
7ZRS|1|5|C|574
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BC
- RPL4A isoform 1
- Chain BF
- 60S ribosomal protein L7-A
- Chain BL
- 60S ribosomal protein L14-A
- Chain BR
- 60S ribosomal protein L20-A
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