IL_7ZRS_123
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GUC*GCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_123 not in the Motif Atlas
- Homologous match to IL_8C3A_023
- Geometric discrepancy: 0.0765
- The information below is about IL_8C3A_023
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7ZRS|1|5|G|669
7ZRS|1|5|U|670
7ZRS|1|5|C|671
*
7ZRS|1|5|G|793
7ZRS|1|5|C|794
7ZRS|1|5|U|795
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BC
- RPL4A isoform 1
- Chain BK
- 60S ribosomal protein L13-A
- Chain BP
- 60S ribosomal protein L18-A
- Chain BZ
- 60S ribosomal protein L28
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