IL_7ZRS_159
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- UGACGAAG*UCGAA
- Length
- 13 nucleotides
- Bulged bases
- 7ZRS|1|5|C|1392
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_159 not in the Motif Atlas
- Homologous match to IL_5TBW_059
- Geometric discrepancy: 0.0736
- The information below is about IL_5TBW_059
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.5
- Basepair signature
- cWW-cWW-tSS-tSH-tHS-cWW-tHS
- Number of instances in this motif group
- 32
Unit IDs
7ZRS|1|5|U|1389
7ZRS|1|5|G|1390
7ZRS|1|5|A|1391
7ZRS|1|5|C|1392
7ZRS|1|5|G|1393
7ZRS|1|5|A|1394
7ZRS|1|5|A|1395
7ZRS|1|5|G|1396
*
7ZRS|1|5|U|1416
7ZRS|1|5|C|1417
7ZRS|1|5|G|1418
7ZRS|1|5|A|1419
7ZRS|1|5|A|1420
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- RPL4A isoform 1
- Chain BE
- 60S ribosomal protein L6-B
- Chain BO
- 60S ribosomal protein L17-A
- Chain BX
- 60S ribosomal protein L26-A
- Chain Bd
- RPL32 isoform 1
Coloring options: