IL_7ZRS_210

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CU*AACG

Length

6 nucleotides

Bulged bases

7ZRS|1|5|A|2942, 7ZRS|1|5|C|2943

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZRS_210 not in the Motif Atlas

Geometric match to IL_5TBW_109

Geometric discrepancy: 0.1087

The information below is about IL_5TBW_109

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7ZRS|1|5|C|2882
7ZRS|1|5|U|2883
*
7ZRS|1|5|A|2941
7ZRS|1|5|A|2942
7ZRS|1|5|C|2943
7ZRS|1|5|G|2944

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BB

60S ribosomal protein L3

Chain BU

60S ribosomal protein L23-A