IL_7ZRS_252

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

UCAAC*GGA

Length

8 nucleotides

Bulged bases

7ZRS|1|5|G|1515

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZRS_252 not in the Motif Atlas

Homologous match to IL_8P9A_290

Geometric discrepancy: 0.1184

The information below is about IL_8P9A_290

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.12

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

22

Unit IDs

7ZRS|1|5|U|1502
7ZRS|1|5|C|1503
7ZRS|1|5|A|1504
7ZRS|1|5|A|1505
7ZRS|1|5|C|1506
*
7ZRS|1|5|G|1514
7ZRS|1|5|G|1515
7ZRS|1|5|A|1516

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BO

60S ribosomal protein L17-A

Chain BQ

60S ribosomal protein L19-A

Chain Bk

60S ribosomal protein L39