IL_7ZRS_259

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

UUCCG*UGA

Length

8 nucleotides

Bulged bases

7ZRS|1|5|C|1017, 7ZRS|1|5|C|1018

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZRS_259 not in the Motif Atlas

Homologous match to IL_8CRE_477

Geometric discrepancy: 0.3236

The information below is about IL_8CRE_477

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31737.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7ZRS|1|5|U|1015
7ZRS|1|5|U|1016
7ZRS|1|5|C|1017
7ZRS|1|5|C|1018
7ZRS|1|5|G|1019
*
7ZRS|1|5|U|1035
7ZRS|1|5|G|1036
7ZRS|1|5|A|1037

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BI

RPL10 isoform 1

Chain BJ

RPL11B isoform 1