IL_7ZS5_039
3D structure
- PDB id
- 7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZS5_039 not in the Motif Atlas
- Homologous match to IL_5TBW_041
- Geometric discrepancy: 0.1812
- The information below is about IL_5TBW_041
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
7ZS5|1|1|A|1006
7ZS5|1|1|U|1007
7ZS5|1|1|U|1008
7ZS5|1|1|A|1009
*
7ZS5|1|1|U|1041
7ZS5|1|1|U|1042
7ZS5|1|1|C|1043
7ZS5|1|1|U|1044
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain BF
- 60S ribosomal protein L5
- Chain BK
- 60S ribosomal protein L10
Coloring options: