IL_7ZS5_104

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCAAG*CGACA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZS5_104 not in the Motif Atlas

Homologous match to IL_8C3A_114

Geometric discrepancy: 0.1601

The information below is about IL_8C3A_114

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65585.1

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7ZS5|1|1|U|2835
7ZS5|1|1|C|2836
7ZS5|1|1|A|2837
7ZS5|1|1|A|2838
7ZS5|1|1|G|2839
*
7ZS5|1|1|C|2849
7ZS5|1|1|G|2850
7ZS5|1|1|A|2851
7ZS5|1|1|C|2852
7ZS5|1|1|A|2853

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain BK

60S ribosomal protein L10

Chain Bn

60S ribosomal protein L40-A