IL_7ZS5_145
3D structure
- PDB id
- 7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUAC*GUU
- Length
- 7 nucleotides
- Bulged bases
- 7ZS5|1|1|U|1181
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZS5_145 not in the Motif Atlas
- Geometric match to IL_4PDQ_004
- Geometric discrepancy: 0.2272
- The information below is about IL_4PDQ_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
7ZS5|1|1|A|1180
7ZS5|1|1|U|1181
7ZS5|1|1|A|1182
7ZS5|1|1|C|1183
*
7ZS5|1|1|G|1323
7ZS5|1|1|U|1324
7ZS5|1|1|U|1325
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain BH
- 60S ribosomal protein L7-A
- Chain BN
- 60S ribosomal protein L14-A
- Chain BP
- 60S ribosomal protein L16-A
- Chain BT
- 60S ribosomal protein L20-A
- Chain Bg
- 60S ribosomal protein L33-A
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