3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
UCU*AUA
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_002 not in the Motif Atlas
Geometric match to IL_4V88_385
Geometric discrepancy: 0.121
The information below is about IL_4V88_385
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
Isolated non-canonical cWW pair
Motif group
IL_44258.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
301

Unit IDs

7ZUX|1|2|U|35
7ZUX|1|2|C|36
7ZUX|1|2|U|37
*
7ZUX|1|2|A|471
7ZUX|1|2|U|472
7ZUX|1|2|A|473

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain DJ
40S ribosomal protein S9-A
Chain DY
40S ribosomal protein S24-A

Coloring options:


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