3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GGGAUC*GUC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_050 not in the Motif Atlas
Homologous match to IL_4V88_435
Geometric discrepancy: 0.154
The information below is about IL_4V88_435
Detailed Annotation
Other IL
Broad Annotation
Other IL
Motif group
IL_22046.1
Basepair signature
cWW-L-cWW-L-cWW-L
Number of instances in this motif group
2

Unit IDs

7ZUX|1|2|G|985
7ZUX|1|2|G|986
7ZUX|1|2|G|987
7ZUX|1|2|A|988
7ZUX|1|2|U|989
7ZUX|1|2|C|990
*
7ZUX|1|2|G|1014
7ZUX|1|2|U|1015
7ZUX|1|2|C|1016

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain 5
Large subunit ribosomal RNA; LSU rRNA
Chain DO
40S ribosomal protein S14-B
Chain Da
40S ribosomal protein S26-B
Chain EA
60S ribosomal protein L2-A
Chain Eo
60S ribosomal protein L43-A

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1525 s