IL_7ZUX_070

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUG*CG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_070 not in the Motif Atlas

Geometric match to IL_6JQ5_005

Geometric discrepancy: 0.3402

The information below is about IL_6JQ5_005

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42771.1

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

7ZUX|1|2|C|1306
7ZUX|1|2|U|1307
7ZUX|1|2|G|1308
*
7ZUX|1|2|C|1317
7ZUX|1|2|G|1318

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain DR

40S ribosomal protein S17-A

Chain Da

40S ribosomal protein S26-B