IL_7ZUX_073

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUG*UUAUC

Length

8 nucleotides

Bulged bases

7ZUX|1|2|U|1370, 7ZUX|1|2|A|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_073 not in the Motif Atlas

Homologous match to IL_4V88_457

Geometric discrepancy: 0.231

The information below is about IL_4V88_457

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7ZUX|1|2|G|1352
7ZUX|1|2|U|1353
7ZUX|1|2|G|1354
*
7ZUX|1|2|U|1369
7ZUX|1|2|U|1370
7ZUX|1|2|A|1371
7ZUX|1|2|U|1372
7ZUX|1|2|C|1373

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain DQ

40S ribosomal protein S16-A

Chain DT

40S ribosomal protein S19-A

Chain DU

40S ribosomal protein S20