3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
ACGGAUC*GUGAAAU
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_092 not in the Motif Atlas
Homologous match to IL_5TBW_015
Geometric discrepancy: 0.0763
The information below is about IL_5TBW_015
Detailed Annotation
Triple sheared with non-canonical cWW
Broad Annotation
Triple sheared
Motif group
IL_66414.7
Basepair signature
cWW-L-R-tSH-tSH-tHS-cWW-cWW
Number of instances in this motif group
7

Unit IDs

7ZUX|1|3|A|13
7ZUX|1|3|C|14
7ZUX|1|3|G|15
7ZUX|1|3|G|16
7ZUX|1|3|A|17
7ZUX|1|3|U|18
7ZUX|1|3|C|19
*
7ZUX|1|5|G|404
7ZUX|1|5|U|405
7ZUX|1|5|G|406
7ZUX|1|5|A|407
7ZUX|1|5|A|408
7ZUX|1|5|A|409
7ZUX|1|5|U|410

Current chains

Chain 3
5.8S ribosomal RNA
Chain 5
25S ribosomal RNA

Nearby chains

Chain EC
60S ribosomal protein L4-A
Chain EO
60S ribosomal protein L17-A
Chain Ed
60S ribosomal protein L32

Coloring options:


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