IL_7ZUX_093

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GU*GAC

Length

5 nucleotides

Bulged bases

7ZUX|1|5|A|338

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_093 not in the Motif Atlas

Homologous match to IL_5TBW_013

Geometric discrepancy: 0.0779

The information below is about IL_5TBW_013

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

7ZUX|1|3|G|25
7ZUX|1|3|U|26
*
7ZUX|1|5|G|337
7ZUX|1|5|A|338
7ZUX|1|5|C|339

Current chains

Chain 3

5.8S ribosomal RNA

Chain 5

25S ribosomal RNA

Nearby chains

Chain EC

60S ribosomal protein L4-A

Chain EX

60S ribosomal protein L26-A