IL_7ZUX_104
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UUCCC*GAUCA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZUX_104 not in the Motif Atlas
- Homologous match to IL_5TBW_376
- Geometric discrepancy: 0.2641
- The information below is about IL_5TBW_376
- Detailed Annotation
- Symmetric double minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.9
- Basepair signature
- cWW-cSH-cWS-tSW-L-R-cWW-R
- Number of instances in this motif group
- 9
Unit IDs
7ZUX|1|4|U|32
7ZUX|1|4|U|33
7ZUX|1|4|C|34
7ZUX|1|4|C|35
7ZUX|1|4|C|36
*
7ZUX|1|4|G|41
7ZUX|1|4|A|42
7ZUX|1|4|U|43
7ZUX|1|4|C|44
7ZUX|1|4|A|45
Current chains
- Chain 4
- 5S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain ED
- 60S ribosomal protein L5
- Chain EJ
- 60S ribosomal protein L11-B
Coloring options: