3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
AU*AGUUGU
Length
8 nucleotides
Bulged bases
7ZUX|1|5|U|147
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_110 not in the Motif Atlas
Geometric match to IL_5TBW_007
Geometric discrepancy: 0.1644
The information below is about IL_5TBW_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_19724.3
Basepair signature
cWW-cWW-L-cWW-L
Number of instances in this motif group
4

Unit IDs

7ZUX|1|5|A|123
7ZUX|1|5|U|124
*
7ZUX|1|5|A|144
7ZUX|1|5|G|145
7ZUX|1|5|U|146
7ZUX|1|5|U|147
7ZUX|1|5|G|148
7ZUX|1|5|U|149

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain 3
5.8S ribosomal RNA; 5.8S rRNA
Chain EG
60S ribosomal protein L8-A
Chain EM
60S ribosomal protein L15-A

Coloring options:


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