IL_7ZUX_113

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UG*UUUGUA

Length

8 nucleotides

Bulged bases

7ZUX|1|5|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_113 not in the Motif Atlas

Homologous match to IL_5TBW_010

Geometric discrepancy: 0.2736

The information below is about IL_5TBW_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37379.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

7ZUX|1|5|U|169
7ZUX|1|5|G|170
*
7ZUX|1|5|U|248
7ZUX|1|5|U|249
7ZUX|1|5|U|250
7ZUX|1|5|G|251
7ZUX|1|5|U|252
7ZUX|1|5|A|253

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EG

60S ribosomal protein L8-A

Chain EK

60S ribosomal protein L13-A

Chain Eg

60S ribosomal protein L35-A