IL_7ZUX_115

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUU*AC

Length

5 nucleotides

Bulged bases

7ZUX|1|5|U|190

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_115 not in the Motif Atlas

Homologous match to IL_8C3A_013

Geometric discrepancy: 0.0965

The information below is about IL_8C3A_013

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

7ZUX|1|5|G|189
7ZUX|1|5|U|190
7ZUX|1|5|U|191
*
7ZUX|1|5|A|204
7ZUX|1|5|C|205

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EC

60S ribosomal protein L4-A

Chain EX

60S ribosomal protein L26-A