IL_7ZUX_116
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGUAC
- Length
- 18 nucleotides
- Bulged bases
- 7ZUX|1|5|A|398, 7ZUX|1|5|A|402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZUX_116 not in the Motif Atlas
- Homologous match to IL_5TBW_014
- Geometric discrepancy: 0.0721
- The information below is about IL_5TBW_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.7
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
7ZUX|1|5|G|376
7ZUX|1|5|A|377
7ZUX|1|5|A|378
7ZUX|1|5|C|379
*
7ZUX|1|5|G|390
7ZUX|1|5|A|391
7ZUX|1|5|G|392
7ZUX|1|5|U|393
7ZUX|1|5|G|394
7ZUX|1|5|A|395
7ZUX|1|5|A|396
7ZUX|1|5|A|397
7ZUX|1|5|A|398
7ZUX|1|5|A|399
7ZUX|1|5|G|400
7ZUX|1|5|U|401
7ZUX|1|5|A|402
7ZUX|1|5|C|403
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain EO
- 60S ribosomal protein L17-A
- Chain EX
- 60S ribosomal protein L26-A
- Chain Ek
- 60S ribosomal protein L39
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