3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GGAUAAAUC*GGAAUAC
Length
16 nucleotides
Bulged bases
7ZUX|1|5|A|520, 7ZUX|1|5|U|521
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_120 not in the Motif Atlas
Homologous match to IL_5TBW_019
Geometric discrepancy: 0.0848
The information below is about IL_5TBW_019
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_74024.1
Basepair signature
cWW-L-R-L-R-L-R-L-R-L-R-cWW
Number of instances in this motif group
2

Unit IDs

7ZUX|1|5|G|518
7ZUX|1|5|G|519
7ZUX|1|5|A|520
7ZUX|1|5|U|521
7ZUX|1|5|A|522
7ZUX|1|5|A|523
7ZUX|1|5|A|524
7ZUX|1|5|U|525
7ZUX|1|5|C|526
*
7ZUX|1|5|G|568
7ZUX|1|5|G|569
7ZUX|1|5|A|570
7ZUX|1|5|A|571
7ZUX|1|5|U|572
7ZUX|1|5|A|573
7ZUX|1|5|C|574

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EC
60S ribosomal protein L4-A
Chain EF
60S ribosomal protein L7-A
Chain EL
60S ribosomal protein L14-A
Chain ER
60S ribosomal protein L20-A

Coloring options:


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