3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GUUUG*CAUAC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_123 not in the Motif Atlas
Homologous match to IL_5TBW_022
Geometric discrepancy: 0.14
The information below is about IL_5TBW_022
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_74284.1
Basepair signature
cWW-L-R-L-R-L-R-cWW
Number of instances in this motif group
2

Unit IDs

7ZUX|1|5|G|681
7ZUX|1|5|U|682
7ZUX|1|5|U|683
7ZUX|1|5|U|684
7ZUX|1|5|G|685
*
7ZUX|1|5|C|697
7ZUX|1|5|A|698
7ZUX|1|5|U|699
7ZUX|1|5|A|700
7ZUX|1|5|C|701

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EC
60S ribosomal protein L4-A
Chain EK
60S ribosomal protein L13-A
Chain EM
60S ribosomal protein L15-A
Chain EZ
60S ribosomal protein L28

Coloring options:


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