IL_7ZUX_127

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUGAUG*CGGAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_127 not in the Motif Atlas

Geometric match to IL_5TBW_026

Geometric discrepancy: 0.175

The information below is about IL_5TBW_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82488.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7ZUX|1|5|C|759
7ZUX|1|5|U|760
7ZUX|1|5|G|761
7ZUX|1|5|A|762
7ZUX|1|5|U|763
7ZUX|1|5|G|764
*
7ZUX|1|5|C|769
7ZUX|1|5|G|770
7ZUX|1|5|G|771
7ZUX|1|5|A|772
7ZUX|1|5|U|773
7ZUX|1|5|G|774

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EK

60S ribosomal protein L13-A

Chain EZ

60S ribosomal protein L28

Chain En

60S ribosomal protein L42-A