IL_7ZUX_130

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GU*GGC

Length

5 nucleotides

Bulged bases

7ZUX|1|5|G|861

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_130 not in the Motif Atlas

Geometric match to IL_5TBW_029

Geometric discrepancy: 0.1162

The information below is about IL_5TBW_029

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

7ZUX|1|5|G|834
7ZUX|1|5|U|835
*
7ZUX|1|5|G|860
7ZUX|1|5|G|861
7ZUX|1|5|C|862

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EA

60S ribosomal protein L2-A

Chain EQ

60S ribosomal protein L19-A

Chain Eo

60S ribosomal protein L43-A