3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
AGU*AU
Length
5 nucleotides
Bulged bases
7ZUX|1|5|G|985
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_138 not in the Motif Atlas
Homologous match to IL_5TBW_037
Geometric discrepancy: 0.0902
The information below is about IL_5TBW_037
Detailed Annotation
Single bulged G
Broad Annotation
No text annotation
Motif group
IL_00225.7
Basepair signature
cWW-L-cWW
Number of instances in this motif group
49

Unit IDs

7ZUX|1|5|A|984
7ZUX|1|5|G|985
7ZUX|1|5|U|986
*
7ZUX|1|5|A|1100
7ZUX|1|5|U|1101

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EF
60S ribosomal protein L7-A
Chain EP
60S ribosomal protein L18-A
Chain ES
60S ribosomal protein L21-A
Chain Ea
60S ribosomal protein L29

Coloring options:


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