3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
UUU*AGA
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_148 not in the Motif Atlas
Homologous match to IL_8C3A_050
Geometric discrepancy: 0.0954
The information below is about IL_8C3A_050
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_52767.5
Basepair signature
cWW-L-R-cWW
Number of instances in this motif group
28

Unit IDs

7ZUX|1|5|U|1124
7ZUX|1|5|U|1125
7ZUX|1|5|U|1126
*
7ZUX|1|5|A|1134
7ZUX|1|5|G|1135
7ZUX|1|5|A|1136

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain 4
5S ribosomal RNA; 5S rRNA
Chain EI
60S ribosomal protein L10
Chain ES
60S ribosomal protein L21-A
Chain Ea
60S ribosomal protein L29

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2175 s