3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GUCAAC*GGAC
Length
10 nucleotides
Bulged bases
7ZUX|1|5|G|1515
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_163 not in the Motif Atlas
Homologous match to IL_8C3A_066
Geometric discrepancy: 0.0876
The information below is about IL_8C3A_066
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_93630.2
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
4

Unit IDs

7ZUX|1|5|G|1501
7ZUX|1|5|U|1502
7ZUX|1|5|C|1503
7ZUX|1|5|A|1504
7ZUX|1|5|A|1505
7ZUX|1|5|C|1506
*
7ZUX|1|5|G|1514
7ZUX|1|5|G|1515
7ZUX|1|5|A|1516
7ZUX|1|5|C|1517

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EO
60S ribosomal protein L17-A
Chain EQ
60S ribosomal protein L19-A
Chain Ek
60S ribosomal protein L39

Coloring options:


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