IL_7ZUX_174

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CC*GUG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_174 not in the Motif Atlas

Homologous match to IL_8C3A_076

Geometric discrepancy: 0.084

The information below is about IL_8C3A_076

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_05035.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

38

Unit IDs

7ZUX|1|5|C|1671
7ZUX|1|5|C|1672
*
7ZUX|1|5|G|1777
7ZUX|1|5|U|1778
7ZUX|1|5|G|1779

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EQ

60S ribosomal protein L19-A

Chain Ef

60S ribosomal protein L34-A