IL_7ZUX_194

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GAA*UACC

Length

7 nucleotides

Bulged bases

7ZUX|1|5|A|2398, 7ZUX|1|5|C|2984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_194 not in the Motif Atlas

Homologous match to IL_8C3A_097

Geometric discrepancy: 0.0794

The information below is about IL_8C3A_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54678.7

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7ZUX|1|5|G|2397
7ZUX|1|5|A|2398
7ZUX|1|5|A|2399
*
7ZUX|1|5|U|2982
7ZUX|1|5|A|2983
7ZUX|1|5|C|2984
7ZUX|1|5|C|2985

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EB

60S ribosomal protein L3

Chain EO

60S ribosomal protein L17-A