IL_7ZUX_196

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

7ZUX|1|5|A|2809

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_196 not in the Motif Atlas

Homologous match to IL_8C3A_099

Geometric discrepancy: 0.0769

The information below is about IL_8C3A_099

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

7ZUX|1|5|G|2413
7ZUX|1|5|A|2414
*
7ZUX|1|5|U|2808
7ZUX|1|5|A|2809
7ZUX|1|5|C|2810
7ZUX|1|5|C|2811

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 6

Transfer RNA; tRNA

Chain EA

60S ribosomal protein L2-A