3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
UAG*UGGG
Length
7 nucleotides
Bulged bases
7ZUX|1|5|G|2607
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_197 not in the Motif Atlas
Homologous match to IL_8C3A_100
Geometric discrepancy: 0.1152
The information below is about IL_8C3A_100
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_38958.10
Basepair signature
cWW-cWW-cWW-tHS
Number of instances in this motif group
9

Unit IDs

7ZUX|1|5|U|2424
7ZUX|1|5|A|2425
7ZUX|1|5|G|2426
*
7ZUX|1|5|U|2605
7ZUX|1|5|G|2606
7ZUX|1|5|G|2607
7ZUX|1|5|G|2608

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain 7
Transfer RNA; tRNA
Chain EA
60S ribosomal protein L2-A
Chain EM
60S ribosomal protein L15-A
Chain En
60S ribosomal protein L42-A

Coloring options:


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