IL_7ZUX_198

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AGA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_198 not in the Motif Atlas

Geometric match to IL_7RQB_030

Geometric discrepancy: 0.2304

The information below is about IL_7RQB_030

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_52767.4

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

7ZUX|1|5|A|2442
7ZUX|1|5|G|2443
7ZUX|1|5|A|2444
*
7ZUX|1|5|U|2505
7ZUX|1|5|U|2506
7ZUX|1|5|U|2507

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain DB

40S ribosomal protein S1-A

Chain Eh

60S ribosomal protein L36-A