3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CG*UGG
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_210 not in the Motif Atlas
Homologous match to IL_8C3A_115
Geometric discrepancy: 0.0758
The information below is about IL_8C3A_115
Detailed Annotation
Major groove platform
Broad Annotation
Major groove platform
Motif group
IL_48779.2
Basepair signature
cWW-L-cWW
Number of instances in this motif group
16

Unit IDs

7ZUX|1|5|C|2877
7ZUX|1|5|G|2878
*
7ZUX|1|5|U|2950
7ZUX|1|5|G|2951
7ZUX|1|5|G|2952

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EB
60S ribosomal protein L3

Coloring options:


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