3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GAU*AC
Length
5 nucleotides
Bulged bases
7ZUX|1|5|A|3179
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_226 not in the Motif Atlas
Geometric match to IL_5TBW_123
Geometric discrepancy: 0.1008
The information below is about IL_5TBW_123
Detailed Annotation
Single bulged A
Broad Annotation
No text annotation
Motif group
IL_31462.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
127

Unit IDs

7ZUX|1|5|G|3178
7ZUX|1|5|A|3179
7ZUX|1|5|U|3180
*
7ZUX|1|5|A|3211
7ZUX|1|5|C|3212

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EE
60S ribosomal protein L6-B
Chain EL
60S ribosomal protein L14-A
Chain EN
60S ribosomal protein L16-A
Chain ER
60S ribosomal protein L20-A
Chain Ee
60S ribosomal protein L33-A

Coloring options:


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