IL_7ZUX_229

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CAACG*UUG

Length

8 nucleotides

Bulged bases

7ZUX|1|5|U|3260

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_229 not in the Motif Atlas

Homologous match to IL_8C3A_133

Geometric discrepancy: 0.1498

The information below is about IL_8C3A_133

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60154.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

7ZUX|1|5|C|3226
7ZUX|1|5|A|3227
7ZUX|1|5|A|3228
7ZUX|1|5|C|3229
7ZUX|1|5|G|3230
*
7ZUX|1|5|U|3259
7ZUX|1|5|U|3260
7ZUX|1|5|G|3261

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EE

60S ribosomal protein L6-B

Chain EL

60S ribosomal protein L14-A

Chain EN

60S ribosomal protein L16-A