IL_7ZUX_237

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUA*UC

Length

5 nucleotides

Bulged bases

7ZUX|1|5|U|3342

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_237 not in the Motif Atlas

Geometric match to IL_3WBM_001

Geometric discrepancy: 0.2099

The information below is about IL_3WBM_001

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

7ZUX|1|5|G|3341
7ZUX|1|5|U|3342
7ZUX|1|5|A|3343
*
7ZUX|1|5|U|3364
7ZUX|1|5|C|3365

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EV

60S ribosomal protein L24-A