IL_7ZUX_249

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GG*UUUC

Length

6 nucleotides

Bulged bases

7ZUX|1|5|U|1821, 7ZUX|1|5|U|1822

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_249 not in the Motif Atlas

Homologous match to IL_8C3A_483

Geometric discrepancy: 0.2522

The information below is about IL_8C3A_483

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25360.1

Basepair signature

cWW-cWW

Number of instances in this motif group

10

Unit IDs

7ZUX|1|5|G|1624
7ZUX|1|5|G|1625
*
7ZUX|1|5|U|1820
7ZUX|1|5|U|1821
7ZUX|1|5|U|1822
7ZUX|1|5|C|1823

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain Ef

60S ribosomal protein L34-A

Chain Ej

60S ribosomal protein L38