IL_7ZW0_010

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUAUUU*AUUCA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_010 not in the Motif Atlas

Geometric match to IL_4V88_393

Geometric discrepancy: 0.0838

The information below is about IL_4V88_393

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37842.2

Basepair signature

cWW-cWW-L-R-cWW-cWW-R-L

Number of instances in this motif group

4

Unit IDs

7ZW0|1|2|U|117
7ZW0|1|2|U|118
7ZW0|1|2|A|119
7ZW0|1|2|U|120
7ZW0|1|2|U|121
7ZW0|1|2|U|122
*
7ZW0|1|2|A|295
7ZW0|1|2|U|296
7ZW0|1|2|U|297
7ZW0|1|2|C|298
7ZW0|1|2|A|299

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sS

40S ribosomal protein S4-B

Chain sV

40S ribosomal protein S8-A