IL_7ZW0_015

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AUU*ACU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_015 not in the Motif Atlas

Geometric match to IL_4V88_398

Geometric discrepancy: 0.1089

The information below is about IL_4V88_398

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7ZW0|1|2|A|206
7ZW0|1|2|U|207
7ZW0|1|2|U|208
*
7ZW0|1|2|A|257
7ZW0|1|2|C|258
7ZW0|1|2|U|259

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sS

40S ribosomal protein S4-B

Chain sV

40S ribosomal protein S8-A