IL_7ZW0_023

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAU*AAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_023 not in the Motif Atlas

Geometric match to IL_3NJ7_003

Geometric discrepancy: 0.0937

The information below is about IL_3NJ7_003

Detailed Annotation

Isolated near basepair

Broad Annotation

Isolated near basepair

Motif group

IL_42997.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

23

Unit IDs

7ZW0|1|2|C|411
7ZW0|1|2|A|412
7ZW0|1|2|U|413
*
7ZW0|1|2|A|420
7ZW0|1|2|A|421
7ZW0|1|2|G|422

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LY

60S ribosomal protein L23-A

Chain sT

40S ribosomal protein S6-B