IL_7ZW0_029

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UA*UAA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_029 not in the Motif Atlas

Geometric match to IL_4V88_388

Geometric discrepancy: 0.1404

The information below is about IL_4V88_388

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

7ZW0|1|2|U|517
7ZW0|1|2|A|518
*
7ZW0|1|2|U|533
7ZW0|1|2|A|534
7ZW0|1|2|A|535

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sW

40S ribosomal protein S9-A

Chain sd

40S ribosomal protein S24-A