IL_7ZW0_042

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGG*CCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_042 not in the Motif Atlas

Geometric match to IL_3GM7_005

Geometric discrepancy: 0.1259

The information below is about IL_3GM7_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7ZW0|1|2|U|822
7ZW0|1|2|G|823
7ZW0|1|2|G|824
*
7ZW0|1|2|C|848
7ZW0|1|2|C|849
7ZW0|1|2|A|850

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LU

60S ribosomal protein L19-A

Chain sX

40S ribosomal protein S11-A