IL_7ZW0_048

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUG*UUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_048 not in the Motif Atlas

Geometric match to IL_4V88_433

Geometric discrepancy: 0.1344

The information below is about IL_4V88_433

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7ZW0|1|2|U|893
7ZW0|1|2|U|894
7ZW0|1|2|G|895
*
7ZW0|1|2|U|917
7ZW0|1|2|U|918
7ZW0|1|2|A|919

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LE

60S ribosomal protein L2-A

Chain sQ

40S ribosomal protein S1-A

Chain sZ

40S ribosomal protein S14-A