IL_7ZW0_054

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

7ZW0|1|2|U|1052

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_054 not in the Motif Atlas

Geometric match to IL_3TZR_002

Geometric discrepancy: 0.1994

The information below is about IL_3TZR_002

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

7ZW0|1|2|G|1051
7ZW0|1|2|U|1052
7ZW0|1|2|G|1053
*
7ZW0|1|2|C|1066
7ZW0|1|2|C|1067

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sG

40S ribosomal protein S17-A

Chain sQ

40S ribosomal protein S1-A

Chain sf

40S ribosomal protein S27-A

Chain sh

FAP1 isoform 1