IL_7ZW0_056

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

7ZW0|1|2|A|1631

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_056 not in the Motif Atlas

Geometric match to IL_5J7L_039

Geometric discrepancy: 0.0617

The information below is about IL_5J7L_039

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

7ZW0|1|2|G|1146
7ZW0|1|2|A|1147
*
7ZW0|1|2|U|1630
7ZW0|1|2|A|1631
7ZW0|1|2|C|1632

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sR

40S ribosomal protein S2

Chain se

40S ribosomal protein S26-A